World Congress on Biosensors 2014

World Congress on Biosensors 2014
Biosensors 2014

Tuesday, 13 December 2011

Just Published: Microchemical Journal

A new issue of this journal has just been published. To see abstracts of the papers it contains (with links through to the full papers) click here:
Selected papers from the latest issue:

Recent advances in dispersive liquid-liquid microextraction using organic solvents lighter than water: A review 

11 December 2011, 02:04:35Go to full article
Publication year: 2011
Source: Microchemical Journal, Available online 9 December 2011
Lívia Kocúrová, Ioseph S. Balogh, Jana Šandrejová, Vasil Andruch
Dispersive liquid–liquid microextraction (DLLME) has in the very short time since its invention in 2006 grabbed the attention of researchers and become very popular among analytical chemists. Like other analytical methods, however, DLLME also has its drawbacks, which result mainly from requirements related to the extraction solvent and disperser solvent. To overcome these various drawbacks, researchers have recently attempted to use solvents with a density lower than that of water and to perform the extraction without using a disperser solvent and without the need for centrifugation. We offer an overview of what in our opinion are some of the most interesting solutions published recently, those which could possibly expand the applicability of DLLME.

Highlights

Methods utilizing special devicesDLLME based on solidification of a floating organic dropLow-density solvent-based solvent demulsification DLLMEMethods based on the adjustment of the solvents mixture density ► Automation of DLLME using sequential injection analysis

Multi-walled carbon nanotubes – solid phase extraction for isolating marine dissolved organic matter before characterization by size exclusion chromatography

11 December 2011, 02:04:35Go to full article
Publication year: 2011
Source: Microchemical Journal, Available online 9 December 2011
Juan Sánchez-González, Natalia García-Otero, Antonio Moreda-Piñeiro, Pilar Bermejo-Barrera
The feasibility of multi-walled carbon nanotubes (MWCNTs) for extracting dissolved organic matter (DOM) from seawater has been investigated. Solid phase extraction (SPE) operating in column and batch modes was used as an extractive technique, and the latter mode offered better performance. DOM adsorption was achieved using 60 mg of MWCNTs per each 250 mL of seawater subsample, working at pH 1.0 and under an orbital-horizontal shaking at 180 rpm and 25 °C for 4 hours. DOM desorption from the MWCNTs support implied an orbital–horizontal shaking (180 rpm and 25 °C) for 2 hours using 10 mL of a 0.1 M sodium hydroxide solution (DOM determination), or using 20 mL of alkaline methanol (pH 10.0) for DOM fractionation by size exclusion chromatography (SEC) with UV detection at 205 nm. A Total Organic Carbon (TOC) analyzer with wet DOM oxidation (30% (m/v) potassium peroxodisulphate in 6.0 M phosphoric acid) under super critical conditions and with Non-Dispersive Infra Red (NDIR) for CO2detection was used for DOM measurements. Calibration covered TOC concentrations within the 0.13–1000 mg Lrange. The percentage of DOM retained in the MWCNTs support was dependent on the seawater sample, and it varied from 34 to 81%. This means that only the DOM of certain molecular weights is capable to interact with the SPE support. Various SEC columns, ranging from 100 to 7000 and from 500 to 15000 Da (optimum separation range for peptides), were therefore used for DOM fractionation. Results have shown that DOM of low molecular weight is retained in the MWCNTs (fractions within the ranges of 125–1102 Da and 6.88–125 Da).

Highlights

► Multi-walled carbon nanotubes (MWCNTs) for isolating marine dissolved organic matter (DOM) ► Effect of the saline matrix and the solid phase extraction mode on the retained DOM ratio ► Size exclusion chromatography for characterizing the retained DOM ► Retained DOM onto MWCNTs is in low molecular weight (within the 125 – 1102 Da range)

Monitoring of solid-state fermentation of wheat straw in a pilot scale using FT-NIR spectroscopy and support vector data description

11 December 2011, 02:04:35Go to full article
Publication year: 2011
Source: Microchemical Journal, Available online 9 December 2011
Hui Jiang, Guohai Liu, Xiahong Xiao, Congli Mei, Yuhang Ding, ...
Fourier transform near-infrared (FT-NIR) spectroscopy coupled with support vector data description (SVDD) as an ideal tool was attempted to rapidly and accurately monitor physical and chemical changes in solid-state fermentation (SSF) of crop straws without the need for chemical analysis. Raw spectra of fermented samples were acquired with wavelength range of 10,000-4,000 cm. SVDD algorithm was employed to build a one-class classification model, and some parameters of SVDD algorithm were optimized by cross-validation in calibrating model. Simultaneously, four traditional two-class classification approaches (i.e., linear discriminant analysis, LDA;K-nearest neighbor, KNN; back propagation neural networks, BPNN; support vector machine, SVM) were comparatively utilized for monitoring time-related changes that occur during SSF. Compared to the four models, SVDD model revealed its incomparable superiority in handling the problem of imbalance training sets. The discrimination rate of SVDD model was 90% in the validation set when the ratio of samples from stationary stage to those from other stages was one to eight. This study demonstrates that FT-NIR spectroscopy combined with SVDD is an efficient method to develop one-class classification model for the rapid monitoring of SSF.

Highlights

► Monitoring of solid-state fermentation (SSF) in a pilot scale by FT-NIR spectroscopy technique. ► Support vector data description (SVDD) was employed to develop identification model. ► Compared to LDA, KNN, BPNN and SVM, SVDD revealed its superiority in handling imbalance training sets. ► This study demonstrates that FT-NIR spectroscopy combined with SVDD is an efficient method for the rapid monitoring of SSF.

Low Profile Deep Well Plate Increases Storage Capacity

Porvair Sciences has introduced a low profile deep well microplate designed to make optimum use of storage space in HPLC autosamplers, robotic stackers and freezers.

The new low profile 96-well deep well plate achieves a storage volume of 1.6ml / well in a height of just 32 mm.  This allows more plates to be stored or stacked in a give space.  Combining an affordable price with uncompromising high quality, Porvair low profile 1.6ml deep well plates are precisely manufactured to comply with ANSI/SBS dimensions** ensuring complete compatibility with all automated sample handling systems, microplate readers and washers.

Porvair's low profile 96-well deep well plate is manufactured from extractable-free polypropylene and undergoes extensive quality testing to ensure a plate of the highest quality.

For further information or a free sample plate please contact Porvair Sciences on telephone +44-1372-824290 or email int.sales@porvair-sciences.com.

Monday, 12 December 2011

Just Published: Analytica Chimica Acta

A new issue of this journal has just been published. To see abstracts of the papers it contains (with links through to the full papers) click here:
Selected papers from the latest issue:

Development of a chromatographic low pressure flow injection system: application to the analysis of methylxanthines in coffee

11 December 2011, 02:34:10Go to full article
Publication year: 2011
Source: Analytica Chimica Acta, Available online 9 December 2011
João Rodrigo Santos, António O.S.S. Rangel
In this work, the coupling of a commercial monolithic column to a traditional low pressure FIA system is proposed for the analysis of theobromine, theophylline and caffeine in coffee brewed samples using UV detection.The parameters mobile phase composition, flow rate and loop volume were evaluated and discussed considering the various chromatographic parameters in order to enable resolution of the methylxanthines studied within the coffee brewed sample matrix. The analyses of methylxanthines in coffee brewed samples by the proposed methodology were in good agreement with those obtained by the reference procedure based on HPLC. Relative errors were below 6% for all samples analyzed. Detection limits in the selected experimental conditions were within 10 M range for theobromine and theophylline, and 10 M for caffeine. The determination rate of the three methylxanthines for coffee brewed samples was ca of 10 h.The main advantage of the proposed flow system was the possibility to perform chromatographic separations in low pressure flow systems. This substantial improvement was achieved due to the compatibility of monolithic columns within the flow injection system surpassing in this way one of the main handicaps of traditional flow analysis systems. Additional features of the strategy presented were low cost, efficiency, high versatility and low reagent consumption comparing to HPLC methodologies usually followed in the case study herein presented

Highlights

► Coupling of monolithic columns into traditional low-pressure FIA systems ► Potential selectivity and increased versatility over low pressure FIA system ► Flow system presenting lower cost of analysis if compared to HPLC

Development of a chromatographic low pressure flow injection system: application to the analysis of methylxanthines in coffee

10 December 2011, 01:25:12Go to full article
Publication year: 2011
Source: Analytica Chimica Acta, Available online 9 December 2011
João Rodrigo Santos, António O.S.S. Rangel
In this work, the coupling of a commercial monolithic column to a traditional low pressure FIA system is proposed for the analysis of theobromine, theophylline and caffeine in coffee brewed samples using UV detection.The parameters mobile phase composition, flow rate and loop volume were evaluated and discussed considering the various chromatographic parameters in order to enable resolution of the methylxanthines studied within the coffee brewed sample matrix. The analyses of methylxanthines in coffee brewed samples by the proposed methodology were in good agreement with those obtained by the reference procedure based on HPLC. Relative errors were below 6% for all samples analyzed. Detection limits in the selected experimental conditions were within 10 M range for theobromine and theophylline, and 10 M for caffeine. The determination rate of the three methylxanthines for coffee brewed samples was ca of 10 h.The main advantage of the proposed flow system was the possibility to perform chromatographic separations in low pressure flow systems. This substantial improvement was achieved due to the compatibility of monolithic columns within the flow injection system surpassing in this way one of the main handicaps of traditional flow analysis systems. Additional features of the strategy presented were low cost, efficiency, high versatility and low reagent consumption comparing to HPLC methodologies usually followed in the case study herein presented

Highlights

► Coupling of monolithic columns into traditional low-pressure FIA systems ► Potential selectivity and increased versatility over low pressure FIA system ► Flow system presenting lower cost of analysis if compared to HPLC

Comparison of ultrasound–assisted emulsification and dispersive liquid–liquid microextraction methods for the speciation of inorganic selenium in environmental water samples using low density extraction solvents

09 December 2011, 00:24:42Go to full article
Publication year: 2011
Source: Analytica Chimica Acta, Available online 8 December 2011
Nahid Mashkouri Najafi, Hamed Tavakoli, Yaser Abdollahzadeh, Reza Alizadeh
Herein, ultrasound–assisted emulsification microextraction (USAEME) and dispersive liquid–liquid microextraction (DLLME) methods based on applying low-density organic solvents have been critically compared for the speciation of inorganic selenium, Se(IV) (selenite) and Se(VI) (selenate) in environmental water samples by gas chromatography–flame ionization detection (GC–FID). At pH = 2 and T = 75 ˚C for 7 min, only Se(IV) was able to form the piazselenol complex with 4–nitro–o–phenylendiamine. Piazselenol was extracted using an extraction solvent and was injected into a GC–FID instrument for the determination of Se(IV). Conveniently, Se(VI) remained in the aqueous phase. Total inorganic selenium was determined after the reduction of Se(VI) to Se(IV) and prior to the above procedures. The Se(VI) concentration was calculated as the difference between the measured total inorganic selenium and Se(IV) content. The effect of various experimental parameters on the efficiencies of the two methods and their optimum values were studied with the aid of response surface methodology and experimental design. Under the optimal conditions, the limit of detections (LODs) for Se(IV) obtained by USAEME-GC-FID and DLLME-GC-FID were 0.05 and 0.11 ng mL, respectively. The relative standard deviations (RSDs, n = 6) for the measurement 10 ng mLof Se(IV) were 5.32% and 4.57% with the enrichment factors of 2491 and 1129 for USAEME-GC-FID and DLLME-GC-FID, respectively. Both methods were successfully applied to the analysis of inorganic selenium in different environmental water samples and certified reference material (NIST SRM 1643e).

Highlights

► USAEME and DLLME have been applied for the speciation of inorganic selenium ► Low density organic solvents have been used as extraction solvent in the two methods ► Response surface methodology has been applied for optimization of the two methods ► The advantages and disadvantages of both methods have been discussed

Development of a dispersive liquid-liquid microextraction method for the determination of fluoroquinolones in chicken liver by high performance liquid chromatography

09 December 2011, 00:24:42Go to full article
Publication year: 2011
Source: Analytica Chimica Acta, Available online 8 December 2011
D. Moema, M.M. Nindi, S. Dube
A simple and cost effective sample pre-treatment method, dispersive liquid liquid microextraction (DLLME), has been developed for the extraction of six fluoroquinolones from chicken liver samples. Clean DLLME extracts were analyzed for fluoroquinolones using liquid chromatography with diode array detection (LC-DAD). Parameters such as type and volume of disperser solvent, type and volume of extraction solvent, concentration and composition of phosphoric acid in the disperser solvent and pH were optimized. Linearity in the concentration range of 30-500 μg kgwas obtained with regression coefficients ranging from 0.9945 to 0.9974. Intra-day repeatability expressed as % RSD was between 4 to 7%. The recoveries determined in spiked blank chicken livers at three concentration levels (i.e. 50, 100 and 300 μg kg) ranged from 83-102%. LODs were between 5 to 19 μg kgwhile LOQs ranged between 23 and 62 μg kg. All of the eight chicken liver samples obtained from the local supermarkets were found to contain at least one type of fluoroquinolone with enrofloxacin being the most commonly detected. Only one sample had four fluoroquinolone antibiotics (ciprofloxacin, difloxacin, enrofloxacin, norfloxacin). Norfloxacin which is unlicensed for use in South Africa was also detected in three of the eight chicken liver samples analyzed. The concentration levels of all FQs antibiotics in eight samples ranged from 8.8 to 35.3 μg kg, values which are lower than the South African stipulated MRL.

Highlights

► We developed DLLME a novel technique has been for fluoroquinolones in chicken livers. ► This greener sample preparation technique has potential for veterinary drugs residue. ► DLLME is a cheap, fast, green method of sample extraction from biological matrixes.

Arsenic speciation in edible alga samples by microwave-assisted extraction and high performance liquid chromatography coupled to atomic fluorescence spectrometry

09 December 2011, 00:24:42Go to full article
Publication year: 2011
Source: Analytica Chimica Acta, Available online 8 December 2011
S. García-Salgado, M.A. Quijano, M.M. Bonilla
Twelve commercially available edible marine algae from France, Japan and Spain and the certified reference material (CRM) NIES No. 9Sargassum fulvellumwere analyzed for total arsenic and arsenic species. Total arsenic concentrations were determined by inductively coupled plasma atomic emission spectrometry (ICP-AES) after microwave digestion and ranged from 23 to 126 μg g. Arsenic species in alga samples were extracted with deionized water by microwave-assisted extraction and showed extraction efficiencies from 49 to 98%, in terms of total arsenic. The presence of eleven arsenic species was studied by high performance liquid chromatography–ultraviolet photo-oxidation–hydride generation atomic–fluorescence spectrometry (HPLC-(UV)-HG-AFS) developed methods, using both anion and cation exchange chromatography. Glycerol and phosphate sugars were found in all alga samples analyzed, at concentrations between 0.11 and 22 μg g, whereas sulfonate and sulfate sugars were only detected in three of them (0.6-7.2 μg g). Regarding arsenic toxic species, low concentration levels of dimethylarsinic acid (DMA) (<0.9 μg g) and generally high arsenate (As(V)) concentrations (up to 77 μg g) were found in most of the algae studied. The results obtained are of interest to highlight the need to perform speciation analysis and to introduce appropriate legislation to limit toxic arsenic species content in these food products.

Highlights

► Total As and As species were analyzed in edible marine algae ► A microwave-assisted extraction method with deionized water was applied ► As compounds identified comprised DMA, As(V) and four arsenosugars ► Considerably high As(V) concentrations were found in the most of the algae studied

Olympus helps to increase reliability and accuracy in optical metrology

The Olympus LEXT OLS4000 is being used for the development of good practice guidelines and new calibration standards in optical metrology. These reference standards are being developed by a team led by Professor Richard Leach, Principal Research Scientist at the National Physical Laboratory (NPL). Preliminary data, presented by Professor Leach at the 10th International Symposium on Measurement Technology and Intelligent Instruments (ISMTII) demonstrated that these calibration standards will help users to eliminate background noise and data uncertainties, thus increasing reliability and accuracy. The good practice guide on the calibration of confocal microscopes will also provide input to the upcoming ISO/WD 25178-607 specification standard, which is currently in development.
As an important component of these calibration standards, Professor Leach’s team is defining good practice guidelines using typical examples of: stylus instruments; white light interferometers; focus variation instruments; and confocal microscopes. This project has established robust and easy-to-use calibration steps and reference standards for all the major areal surface measurement instrumentation technologies. As part of this, NPL is developing a box of artefacts (optical flat, step heights, lateral grids, star patterns, sphere on plane, deterministic) to allow calibration in compliance with the latest draft ISO standard. Once finalised, users can implement these to gain a level of confidence in the accuracy and trueness of their resulting data.
The Olympus LEXT OLS4000
Further demonstrating the reliability and accuracy of the LEXT OLS4000, Mr Hitoshi Suzuki, Olympus Corporation, Japan presented his findings on ‘A study of surface measuring limitation on a laser scanning microscope by the examination of response properties of surface texture and slope detection on a ruby sphere sample’, at the EUSPEN conference in May. Since identifying and rejecting doubtful measurements is key to maintaining accuracy, instruments need to be able to produce repeatable results. Accuracy when using a CLSM depends on the numerical aperture (NA) of the objective lens; steep slope measurements up to 80º can be accurately obtained with the LEXT OLS4000 when using a 0.95 NA lens.
Please contact:
OLYMPUS EUROPA HOLDING GMBH
Katja Ansmann
Marketing Communications Manager
Tel: +49 40 2 37 73 - 5913
Fax: +49 40 2 37 73 - 4656
E-mail: mailto:esther.ahrent@olympus-europa.com
http://www.microscopy.olympus.eu/
For Olympus in the USA, please contact:Ilene Semiatin
Edge Communications Inc.
White Plains, NY 10605
1.914.684.0959
Ilene@edge-comm.net

Friday, 9 December 2011

Just Published: Journal of Chromatography A

A new issue of this journal has just been published. To see abstracts of the papers it contains (with links through to the full papers) click here:
Selected papers from the latest issue:

Effect of Nacl Additive on Properties of Aqueous Peg-Sodium Sulfate Two-Phase System

08 December 2011, 23:45:11Go to full article
Publication year: 2011
Source: Journal of Chromatography A, Available online 8 December 2011
Luisa A. Ferreira, Pier Parpot, José A. Teixeira, Larissa M. Mikheeva, Boris Y. Zaslavsky
The concentrations of all components in the phases of aqueous two-phase polyethylene glycol-sodium sulfate system of a fixed composition with different concentrations of NaCl additive were determined. Solvatochromic solvent features of aqueous media in the phases of all the systems were characterized in terms of solvent dipolarity/polarizability, solvent hydrogen bond donor acidity and hydrogen bond acceptor basicity. Partitioning of a homologous series of dinitrophenylated amino acids with aliphatic alkyl side chain was examined in all the systems, and the differences between the relative hydrophobicity and electrostatic properties of the phases were quantified. These differences were described in terms of solvatochromic solvent features of the phases. The previously reported partition coefficients of twelve different nonionic compounds in all the systems were expressed in terms of solute descriptors. It is demonstrated that two solvatochromic solvent descriptors (solvent dipolarity/polarizability, and solvent hydrogen bond donor acidity) could adequately describe the partitioning of the solutes in all the systems employed.

Highlights

► Phase composition of PEG-Na2SO4–water system with different NaCl amounts determined ► Solvatochromic solvent features of aqueous media in the phases quantified ► Hydrophobic and electrostatic propertiers of phases described via solvent features ► Partition coefficients of nonionic solutes are expressed via solute descriptors ► Solvent dipolarity/polarizability and H-bond acidity govern partitioning of solutes

Dummy molecularly imprinted polymers on silica particles for selective solid-phase extraction of tetrabromobisphenol A from water samples

08 December 2011, 23:45:11Go to full article
Publication year: 2011
Source: Journal of Chromatography A, Available online 8 December 2011
Yu-Min Yin, Yi-Ping Chen, Xiang-Feng Wang, Yuan Liu, Hai-Ling Liu, ...
Surface molecular imprinted polymers (MIPs) on silica gel particles for highly selective recognition of Tetrabromobisphenol A (TBBPA) were prepared by a sol–gel process. Diphenolic Acid (DPA) and Bisphenol A (BPA),whose structures were similar to that of TBBPA were selected as dummy template molecules, and 3-aminopropyltriethoxysilane (APTES) and tetramethoxysilane (TEOS) were chosen as functional monomer and cross-linker, respectively. The obtained materials were characterized by FTIR with diffuse reflectance accessory and the results indicated polymers were successfully grafted on the surface of silica gel supporters. The maximum static adsorption capacities for TBBPA of the DPA-MIPs, BPA-MIPs and non imprinted polymers (NIP) were 45, 38 and 22 mg grespectively, and the results of dynamic adsorption showed that the adsorption equilibrium can be achieved within 15 min for DPA- and BPA-MIPs. Both the DPA- and BPA-MIPs have higher selectivity for TBBPA than that of NIP when they are used as the sorbents for the solid phase extraction (SPE), while the adsorption property of DPA-MIPs was superior to that of BPA-MIPs at low concentration levels of TBBPA. The results indicated DPA-MIPs had more high affinity binding sites for TBBPA, which demonstrated that the strong interactions between the template and the functional monomer were favorable to form high affinity binding sites and improve the selectivity of the polymers. A corresponding analytical method for determination of the TBBPA residues in environmental samples was developed. The recoveries of TBBPA in tap water, river water and lake water were in the range from 85% to 97% with relative standard deviations below 7%, and its limit of detection can reach 2 ng mL.

Highlights

► Highly selective surface molecular imprinted polymers for TBBPA were prepared. ► Diphenolic Acid was selected as the dummy template molecule of the MIPs. ► Method for determination of the TBBPA residues in water samples was developed.

A Liquid Chromatography-Tandem Mass Spectrometry Method for the Detection of Economically Motivated Adulteration in Protein-containing Foods

08 December 2011, 23:45:11Go to full article
Publication year: 2011
Source: Journal of Chromatography A, Available online 8 December 2011
Shaun MacMahon, Timothy H. Begley, Gregory W. Diachenko, Selen A. Stromgren
A new analytical method was developed to determine the presence of six (6) compounds with the potential to be used in economic adulteration to enhance the nitrogen content in milk products and bulk proteins. Residues were extracted from the matrix with 2% formic acid, after which acetonitrile (ACN) was added to induce precipitation of the proteins. Extracts were analyzed by liquid chromatography using a ZIC-HILIC column with tandem mass spectrometry (LC-MS/MS) using electrospray ionization (ESI). Single-laboratory method validation data was collected in six matrices fortified at concentrations down to 1.0 μg/g (ppm). Average recoveries and average relative standard deviations (RSD) using spiked matrix calibration standard curves were the following: cyromazine (CY) 95.9% (7.5% RSD), dicyandiamide (DC) 98.1% (5.6% RSD), urea 102.5% (8.6% RSD), biuret (BU) 97.2% (6.6% RSD), triuret (TU) 97.7% (5.7% RSD), and amidinourea (AU) 93.4% (7.4% RSD). This method provides a rapid and effective approach to proactively combat economically motivated adulteration in protein-containing products.

Highlights

► A method to detect economic adulteration in protein-containing foods ► Uses LC-MS/MS to detect 6 potential food adulterants ► Quantitative validation in 6 different bulk food matrices

Acquisition of Platinum Medical Imaging

Oxford Instruments plc (“Oxford Instruments”), a leading provider of high technology tools and systems for industry and research, announces the acquisition of Platinum Medical Imaging LLC (“Platinum”).

Platinum is an established US company providing high quality parts and services and  turnkey solutions, including equipment selection, site planning, installation and hands-on training for MRI (Magnetic Resonance Imaging) and CT (Computerised Tomography) medical imaging instruments.  . Recent healthcare reforms in the US have encouraged medical imaging facilities to move to more cost effective service providers.  This has presented   a growing opportunity in this third party service market to providers like Platinum, which has enjoyed significant growth over recent years due to its high level of customer focus.     

“Platinum is committed to offering outstanding value, high standard and no compromise. We do this by listening to our customers and offering them the right level of support and training, and delivering quality products and service.   The increased resources that will now be available for our combined business will allow us to expand and fully realise our potential.  I am excited about the future of the business” said Jeffrey Fall, President Platinum Medical Imaging. 

The combination of Platinum with OiService, Oxford Instruments’ existing MRI Service business in North America, significantly strengthens the Group’s broader service offerings and the opportunity for   further development of its global service.

Commenting on the acquisition, Jonathan Flint, Chief Executive of Oxford Instruments, stated:  “I am delighted to welcome Platinum into the Oxford Instruments Group. MRI service is the cornerstone of our Service business and with Platinum, our position is substantially strengthened in the US market”

Thursday, 8 December 2011

Just Published: Journal of Chromatography B

A new issue of this journal has just been published. To see abstracts of the papers it contains (with links through to the full papers) click here:
Selected papers from the latest issue:

PCR-Ready Human DNA Extraction from Urine Samples Using Magnetic Nanoparticles

06 December 2011, 22:06:28Go to full article
Publication year: 2011
Source: Journal of Chromatography B, Available online 6 December 2011
Zhi Shan, Zhongwu Zhou, Hui Chen, Zhiming Zhang, Yi Zhou, ...
Urine-derived human genomic DNA (gDNA) has wide application in a variety of disciplines including clinical medicine, sports, and forensic science. We describe a novel method for gDNA extraction from urine samples using carboxylated magnetic nanoparticles (CMNPs) as solid-phase adsorbents. Sedimentation associated with freezing of urine samples significantly reduces cell capture by CMNPs. However, the addition of 10 mM EDTA and subsequent pH modification (pH 6.0-7.1) can re-dissolve urine sediments. Purified gDNA ranged from around 0.1 kb to more than 23 kb. PCR using specific primers targetingK-ras,GAPDH,CYP3A4andGDF5amplified 100% of varying sized gene fragments, verifying the high quality of the isolated DNA. Successful PCR amplifications using DNA isolated from urine samples as small as 50 μl were demonstrated. Enrichment of urine cells and subsequent adsorption of DNA can be achieved with the same CMNPs, greatly simplifying extraction procedures. The CMNP gDNA extraction technique proved to be simple, rapid, sensitive and environmentally friendly, with application for routine laboratory use and potentially within automated urine extraction platforms.

Highlights

► A method for urine DNA extraction using carboxylated magnetic nanoparticles was developed. ► The addition of 10 mM EDTA and pH modification (pH 6.0-7.1) can re-dissolve urine sediments. ► Purified DNA ranged from around 0.1 kb to more than 23 kb. ► DNA quality was validated by its yield, molecular weight, and the ability to serve as PCR templates. ► The developed method proved to be simple, rapid, sensitive and environmentally friendly.

Competitive binding between 4,4’-diphenylmethane-bis(methyl) carbamate and RAGE ligand MG-H1 on human umbilical vein endothelial cell by cell membrane chromatography

06 December 2011, 22:06:28Go to full article
Publication year: 2011
Source: Journal of Chromatography B, Available online 6 December 2011
Liang Feng, You-hua Xu, Shan-shan Wang, Wai Au-yeung, Zhao-guang Zheng, ...
The compound 4,4’-diphenylmethane-bis(methyl) carbamate (CM1) has a protective activity on AGEs-induced endothelial dysfunction on human umbilical vein endothelial cell (HUVEC) in our previous study. It suggested that CM1 which may act as a competitive antagonist to the blockade of AGEs to receptor of AGEs (RAGE) and attenuate the HUVEC damage. In order to testify that hypothesis, the cell membrane chromatography (CMC) combined with high performance liquid chromatography (HPLC) was developed for analyzing the competitive binding properties on RAGE of HUVEC between CM1 and MG-H1, the agonist of RAGE. The results from saturation binding of CM1 and MG-H1 on cells demonstrated that dissociation equilibrium constants (Kd) of CM1 and MG-H1 were 3.653 nM and 4.12 nM, respectively; While maximum binding capacity (Bmax) of CM1 and MG-H1 were 30.08 and 18.72 fmol/mg protein, respectively. In competition experiments, IC50of CM1 with pre-incubation 10 M and 10 M MG-H1 were 1.37 × 10 M and 4.56 × 10 M, respectively. The present findings indicated that CM1 conjugated competitively to cells with RAGE ligand MG-H1. The primary study illustrated that CMC combined with HPLC analysis method could be an alternative, rapid and efficient approach for the interaction of drug molecule and receptor, and that CM1 intervene the AGEs inducing HUVEC damage may via the competitively block the AGEs-RAGE path way.

Highlights

► CM1 competitively bind to RAGE with RAGE ligand MG-H1 ► A HPLC method was established for competition binding of CM1 with MG-H1 ► This method was an alternative way for competitive binding of drug to receptor ► This binding was performed on intact cells.

The role of liquid chromatography-tandem mass spectrometry in the clinical laboratory

06 December 2011, 22:06:28Go to full article
Publication year: 2011
Source: Journal of Chromatography B, Available online 6 December 2011
Johannes M.W. van den Ouweland, Ido P. Kema
Liquid chromatography coupled to mass spectrometry (LC-MS/MS) is increasingly used as a routine methodology in clinical laboratories for the analysis of low molecular weight molecules. The high specificity in combination with high sensitivity and multi-analyte potential makes it an attractive complementary method to traditional methodology used for routine applications. Its strength and weaknesses in this context will be discussed and examples of successful clinical applications will be given. For LC-MS/MS to truly fulfil its promise in clinical diagnosis, the prerequisite steps being sample pre-treatment, chromatographic separation and detection by selected reaction monitoring must become more integrated as they are in conventional clinical analyzers. The availability of ready-to-use reagents kits, eliminating efforts needed for method development and extensive validation, are likely to contribute to a wider acceptance of LC-MS/MS in clinical laboratories. Growing applicability of LC-MS/MS in the clinical laboratory field is expected from quantitative protein analysis.

Profiling and characterization of volatile secretions from the European stink bugGraphosoma lineatum(Heteroptera: Pentatomidae) by two-dimensional gas chromatography/time-of-flight mass spectrometry

06 December 2011, 22:06:28Go to full article
Publication year: 2011
Source: Journal of Chromatography B, Available online 6 December 2011
Miloslav Šanda, Petr Žáček, Ludvík Streinz, Martin Dračínský, Bohumír Koutek
An efficient method combining the headspace solid-phase microextraction (HS-SPME) sampling procedure and comprehensive two-dimensional gas-chromatography/time-of-flight mass spectrometry (GCxGC/TOF-MS) was established to study the volatile secretion components of stink bugs (Heteroptera: Pentatomidae). The combined power of this approach is illustrated by the identification of fifty-seven compounds in the secretion of a European stink-bug representative,Graphosoma lineatum. (E)-4-oxohex-2-enal and (E)-dec-2-enal were found to be the major components in the adult bug secretions followed by lower amounts ofn-alkenal (C5–C12),n- alkenyl acetate (C5–C11),n-alkane (C11–C17) homologs, dienals and other compounds. More than thirty known compounds have been identified that had not been described before inG.lineatumadults. Of these compounds, (E)-4-oxohex-2-enal is of particular interest, since its isolation and identification, while calling some previous reports into question, clearly demonstrates a potential ability of our approach to yield artifact-free secretion profiles.

Highlights

► Analysis of volatile secretions from the European stink bugGraphosoma lineatum. ► Analysis using HS–SPME coupled to GCxGC/TOF-MS. ► Identification of 57 compounds, 39 of these are reported for the first time. ► No differences in the composition of the secretions between sexes were found.